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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop sl2 of the psi-RNA packaging signal. Implications for genome recognition

Results of the assignment of 340 detected steps in 20 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
0011f6u-m10_B_G202_C203AAAAA08420.43AA08
0021f6u-m11_B_G202_C203NANNANT00.53AA08
0031f6u-m12_B_G202_C203NANNANT00.50AA08
0041f6u-m13_B_G202_C203AAAAA08230.52AA08
0051f6u-m14_B_G202_C203NANNANT00.52AA08
0061f6u-m15_B_G202_C203AAAAA08110.51AA08
0071f6u-m16_B_G202_C203NANNANT00.53AA08
0081f6u-m17_B_G202_C203NANNANT00.51AA08
0091f6u-m18_B_G202_C203NANNANT00.57AA03
0101f6u-m19_B_G202_C203AAAAA08160.50AA08
0111f6u-m1_B_G202_C203AAAAA08460.45AA08
0121f6u-m20_B_G202_C203NANNANT00.51AA08
0131f6u-m2_B_G202_C203AAAAA08390.46AA08
0141f6u-m3_B_G202_C203AAAAA08100.48AA08
0151f6u-m4_B_G202_C203AAAAA08220.47AA08
0161f6u-m5_B_G202_C203AAAAA08300.45AA08
0171f6u-m6_B_G202_C203AAAAA08160.51AA08
0181f6u-m7_B_G202_C203NANNANT00.57AA03
0191f6u-m8_B_G202_C203AAAAA08140.52AA08
0201f6u-m9_B_G202_C203AAAAA08270.45AA08
0211f6u-m10_B_C203_G204AAAAA03760.40AA03
0221f6u-m11_B_C203_G204AAAAA00440.44AA00
0231f6u-m12_B_C203_G204AAAAA00510.37AA00
0241f6u-m13_B_C203_G204NANNANT00.46AA03
0251f6u-m14_B_C203_G204AAAAA00460.46AA00
0261f6u-m15_B_C203_G204AAAAA08480.47AA08
0271f6u-m16_B_C203_G204AAAAA04510.63AA04
0281f6u-m17_B_C203_G204NANNANT00.50AA08
0291f6u-m18_B_C203_G204AAAAA08230.45AA08
0301f6u-m19_B_C203_G204NANNANT00.53AA08
0311f6u-m1_B_C203_G204AAAAA03690.38AA03
0321f6u-m20_B_C203_G204NANNANT00.47AA00
0331f6u-m2_B_C203_G204AAAAA08490.45AA08
0341f6u-m3_B_C203_G204AAAAA00560.41AA00
0351f6u-m4_B_C203_G204AAAAA00110.46AA00
0361f6u-m5_B_C203_G204AAAAA03590.40AA03
0371f6u-m6_B_C203_G204AAAAA08500.45AA08
0381f6u-m7_B_C203_G204AAAAA03330.41AA03
0391f6u-m8_B_C203_G204NANNANT00.58AA08
0401f6u-m9_B_C203_G204AAAAA03600.40AA03
0411f6u-m10_B_G204_A205AAAAA00220.46AA00
0421f6u-m11_B_G204_A205AAAAA08440.38AA08
0431f6u-m12_B_G204_A205AAAAA08360.41AA08
0441f6u-m13_B_G204_A205NANNANT00.55AA08
0451f6u-m14_B_G204_A205NANNANT00.61AA06
0461f6u-m15_B_G204_A205AAAAA08420.39AA08
0471f6u-m16_B_G204_A205AAAAA0890.40AA08
0481f6u-m17_B_G204_A205NANNANT00.57BA10
0491f6u-m18_B_G204_A205AAAAA08260.40AA08
0501f6u-m19_B_G204_A205NANNANT00.57BA10
0511f6u-m1_B_G204_A205NANNANT00.60AA06
0521f6u-m20_B_G204_A205NANNANT00.58BA10
0531f6u-m2_B_G204_A205AAAAA08280.44AA08
0541f6u-m3_B_G204_A205AAAAA04360.56AA04
0551f6u-m4_B_G204_A205AAAAA08420.35AA08
0561f6u-m5_B_G204_A205AAAAA08300.38AA08
0571f6u-m6_B_G204_A205AAAAA08240.38AA08
0581f6u-m7_B_G204_A205NANNANT00.60AA06
0591f6u-m8_B_G204_A205NANNANT00.62AA06
0601f6u-m9_B_G204_A205AAAAA08320.40AA08
0611f6u-m10_B_A205_C206AAAAA08150.62AA08
0621f6u-m11_B_A205_C206AAAAA08170.47AA08
0631f6u-m12_B_A205_C206AAAAA08270.48AA08
0641f6u-m13_B_A205_C206AAAAA04430.53AA04
0651f6u-m14_B_A205_C206NANNANT00.62AA08
0661f6u-m15_B_A205_C206AAAAA08180.58AA08
0671f6u-m16_B_A205_C206AAAAA08110.60AA08
0681f6u-m17_B_A205_C206NANNANT00.72AA04
0691f6u-m18_B_A205_C206AAAAA08110.64AA08
0701f6u-m19_B_A205_C206NANNANT00.75AA04
0711f6u-m1_B_A205_C206NANNANT00.54AA08
0721f6u-m20_B_A205_C206NANNANT00.62AA08
0731f6u-m2_B_A205_C206AAAAA08310.50AA08
0741f6u-m3_B_A205_C206NANNANT00.54AA08
0751f6u-m4_B_A205_C206AAAAA08160.64AA08
0761f6u-m5_B_A205_C206AAAAA08260.57AA08
0771f6u-m6_B_A205_C206AAAAA08180.49AA08
0781f6u-m7_B_A205_C206NANNANT00.66AA08
0791f6u-m8_B_A205_C206NANNANT00.59AA08
0801f6u-m9_B_A205_C206AAAAA08190.53AA08
0811f6u-m10_B_C206_U207AAAAA03390.48AA03
0821f6u-m11_B_C206_U207AAAAA03360.40AA03
0831f6u-m12_B_C206_U207AAAAA09290.41AA09
0841f6u-m13_B_C206_U207AAAAA08110.55AA08
0851f6u-m14_B_C206_U207AAAAA08200.53AA08
0861f6u-m15_B_C206_U207AAAAA03400.52AA03
0871f6u-m16_B_C206_U207AAAAA08220.42AA08
0881f6u-m17_B_C206_U207AAAAA03490.39AA03
0891f6u-m18_B_C206_U207AAAAA08190.53AA08
0901f6u-m19_B_C206_U207AAAAA08500.39AA08
0911f6u-m1_B_C206_U207AAAAA08150.45AA08
0921f6u-m20_B_C206_U207AAAAA03120.35AA03
0931f6u-m2_B_C206_U207AAAAA09290.42AA09
0941f6u-m3_B_C206_U207NANNANT00.44AA08
0951f6u-m4_B_C206_U207AAAAA08220.41AA08
0961f6u-m5_B_C206_U207AAAAA08160.47AA08
0971f6u-m6_B_C206_U207AAAAA08190.50AA08
0981f6u-m7_B_C206_U207AAAAA08400.46AA08
0991f6u-m8_B_C206_U207AAAAA0850.60AA08
1001f6u-m9_B_C206_U207NANNANT00.37AA03
1011f6u-m10_B_U207_G208AAAAA00340.41AA00
1021f6u-m11_B_U207_G208AAAAA08540.42AA08
1031f6u-m12_B_U207_G208AAAAA08250.48AA08
1041f6u-m13_B_U207_G208NANNANT00.68BA10
1051f6u-m14_B_U207_G208NANNANT00.66BA10
1061f6u-m15_B_U207_G208AAAAA08600.40AA08
1071f6u-m16_B_U207_G208NANNANT00.57AA11
1081f6u-m17_B_U207_G208AAAAA08510.43AA08
1091f6u-m18_B_U207_G208NANNANT00.99BA09
1101f6u-m19_B_U207_G208AAAAA00310.42AA00
1111f6u-m1_B_U207_G208AAAAA00170.42AA00
1121f6u-m20_B_U207_G208NANNANT00.79AA05
1131f6u-m2_B_U207_G208NANNANT00.44AA08
1141f6u-m3_B_U207_G208NANNANT00.50AA08
1151f6u-m4_B_U207_G208NANNANT00.77AA05
1161f6u-m5_B_U207_G208NANNANT00.54AA05
1171f6u-m6_B_U207_G208NANNANT00.67AA05
1181f6u-m7_B_U207_G208NANNANT00.47AA04
1191f6u-m8_B_U207_G208NANNANT00.76BA10
1201f6u-m9_B_U207_G208NANNANT00.62AA08
1211f6u-m10_B_G208_G209NANNANT01.27OP21
1221f6u-m11_B_G208_G209NANNANT01.30OP21
1231f6u-m12_B_G208_G209NANNANT01.29OP21
1241f6u-m13_B_G208_G209NANNANT01.30OP21
1251f6u-m14_B_G208_G209NANNANT01.29OP21