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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

©Jiří Černý & Bohdan Schneider

METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR

Results of the assignment of 17 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
011mjp_C_DT1_DT2BBBBB00280.34BB00
021mjp_C_DT2_DA3NANNANT00.37BB04
031mjp_C_DA3_DG4BBBBB00510.40BB00
041mjp_C_DG4_DA5BB2BB07520.34BB07
051mjp_C_DA5_DC6BBwBB02190.21BB02
061mjp_C_DC6_DG7BBBBB00740.27BB00
071mjp_C_DG7_DT8BBBBB00910.16BB00
081mjp_C_DT8_DC9BBBBB00170.25BB00
091mjp_C_DC9_DT10BBBBB00760.24BB00
101mjp_D_DA1_DG2BBBBB00360.46BB00
111mjp_D_DG2_DA3B12BB04910.20BB04
121mjp_D_DA3_DC4miBBB15900.19BB15
131mjp_D_DC4_DG5B12BB04700.18BB04
141mjp_D_DG5_DT6BBBBB00750.18BB00
151mjp_D_DT6_DC7BBBBB00670.31BB00
161mjp_D_DC7_DT8B12BB04650.33BB04
171mjp_D_DT8_DA9B12BB04320.47BB04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Download

Results as csv or json file.
Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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