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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
BIV TAT PEPTIDE (RESIDUES 68-81), NMR, MINIMIZED AVERAGE STRUCTURE

Results of the assignment of 27 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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step numberStep nameCANANtCconfalrmsd
011mnb_B_G1_G2AAAAA00760.27AA00
021mnb_B_G2_C3AAAAA00880.19AA00
031mnb_B_C3_U4AAAAA00830.17AA00
041mnb_B_U4_C5AAAAA00750.23AA00
051mnb_B_C5_G6AAAAA00360.40AA00
061mnb_B_G6_U7NANNANT00.97AA07
071mnb_B_U7_G8NANNANT00.92AB02
081mnb_B_G8_U9NANNANT01.10OP13
091mnb_B_U9_A10NANNANT00.90OP11
101mnb_B_A10_G11AAAAA00680.30AA00
111mnb_B_G11_C12AAAAA00470.31AA00
121mnb_B_C12_U13AAAAA00320.39AA00
131mnb_B_U13_C14AAAAA09120.61AA09
141mnb_B_C14_A15NANNANT01.43IC04
151mnb_B_A15_U16NANNANT00.56BB11
161mnb_B_U16_U17NANNANT01.36BB02
171mnb_B_U17_A18NANNANT01.10OP12
181mnb_B_A18_G19NANNANT00.51AA01
191mnb_B_G19_C20NANNANT00.44AA01
201mnb_B_C20_U21NANNANT00.69IC03
211mnb_B_U21_C22AAAAA00760.19AA00
221mnb_B_C22_C23AAAAA00640.25AA00
231mnb_B_C23_G24AAAAA00730.31AA00
241mnb_B_G24_A25AAAAA00880.16AA00
251mnb_B_A25_G26AAAAA00850.21AA00
261mnb_B_G26_C27AAAAA00820.15AA00
271mnb_B_C27_C28AAAAA00880.12AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

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Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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