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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Crystal Structure of the MutS-ADPBeF3-DNA complex

Results of the assignment of 43 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
011nne_C_DG1901_DC1902NANNANT00.61BB02
021nne_C_DC1902_DG1903BB1BB11680.41BB11
031nne_C_DG1903_DA1904BB1BB02660.35BB02
041nne_C_DA1904_DC1905NANNANT00.42BB05
051nne_C_DC1905_DG1906BB1BB02540.48BB02
061nne_C_DG1906_DC1907BBBBB00640.21BB00
071nne_C_DC1907_DT1908BBBBB00640.33BB00
081nne_C_DT1908_DA1909BB2BB07560.27BB07
091nne_C_DA1909_DG1910BB1BB02540.32BB02
101nne_C_DG1910_DC1911B12BB04660.21BB04
111nne_C_DC1911_DG1912NANNANT00.59BB10
121nne_C_DG1912_DT1913NANNANT01.27BB02
131nne_C_DT1913_DG1914NANNANT01.03BB00
141nne_C_DG1914_DC1915BBBBB00870.24BB00
151nne_C_DC1915_DG1916NANNANT00.50BB11
161nne_C_DG1916_DG1917BB1BB02550.52BB02
171nne_C_DG1917_DC1918BBBBB00520.40BB00
181nne_C_DC1918_DT1919BB1BB02880.17BB02
191nne_C_DT1919_DC1920BBBBB00710.28BB00
201nne_C_DC1920_DG1921B12BB04700.21BB04
211nne_C_DG1921_DT1922BBBBB00420.32BB00
221nne_C_DT1922_DC1923NANNANT00.64BB10
231nne_D_DG1951_DG1952NANNANT01.07BB04
241nne_D_DG1952_DA1953BBBBB00640.25BB00
251nne_D_DA1953_DC1954BBBBB00720.24BB00
261nne_D_DC1954_DG1955miBBB12120.59BB12
271nne_D_DG1955_DA1956BBBBB00150.64BB00
281nne_D_DA1956_DG1957BBBBB00740.22BB00
291nne_D_DG1957_DC1958B12BB04550.32BB04
301nne_D_DC1958_DC1959BBBBB00630.30BB00
311nne_D_DC1959_DG1960BB1BB02150.42BB02
321nne_D_DG1960_DC1961B12BB04580.33BB04
331nne_D_DC1961_DC1962NANNANT00.32IC06
341nne_D_DC1962_DG1963BB1BB02780.20BB02
351nne_D_DG1963_DC1964BBBBB00750.29BB00
361nne_D_DC1964_DT1965BB1BB02790.21BB02
371nne_D_DT1965_DA1966BBBBB00550.42BB00
381nne_D_DA1966_DG1967BBBBB00820.27BB00
391nne_D_DG1967_DC1968BB1BB02570.33BB02
401nne_D_DC1968_DG1969NANNANT00.41BB03
411nne_D_DG1969_DT1970NANNANT00.84AB02
421nne_D_DT1970_DC1971BB2BB08690.40BB08
431nne_D_DC1971_DG1972NANNANT01.15BB03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Drag the plot for panning, scroll to zoom, click a point to show superposition in JSmol.

Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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