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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES

Results of the assignment of 7 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
11rxa_A_C1_C2AAAAA03480.28AA03
21rxa_A_C2_C3NANNANT00.37AA03
31rxa_A_C3_C4AAAAA00100.27AA00
41rxa_A_C4_G5AAAAA03610.33AA03
51rxa_A_G5_G6NANNANT00.33AA04
61rxa_A_G6_G7AAAAA03710.33AA03
71rxa_A_G7_G8NANNANT00.55AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

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Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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