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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Dengue virus 4 NS3 helicase in complex with ssRNA and ADP

Results of the assignment of 10 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
012jlz_C_A1_G2AAAAA00710.24AA00
022jlz_C_G2_A3AAAAA00880.14AA00
032jlz_C_A3_C4AAAAA00780.14AA00
042jlz_C_C4_U5AAAAA04680.45AA04
052jlz_C_U5_A6NANNANT01.97OP11
062jlz_D_A1_G2AAAAA00680.22AA00
072jlz_D_G2_A3AAAAA00820.16AA00
082jlz_D_A3_C4AAAAA00910.15AA00
092jlz_D_C4_U5AAAAA04880.26AA04
102jlz_D_U5_A6NANNANT01.36ZZ1S

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Drag the plot for panning, scroll to zoom, click a point to show superposition in JSmol.

Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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