Results of the assignment of 36 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
| step number | Step name | CANA | NtC | confal | rmsd | |
|---|---|---|---|---|---|---|
| 01 | 3hp6_B_DC21_DG22 | BB2 | BB07 | 33 | 0.28 | BB07 |
| 02 | 3hp6_B_DG22_DA23 | BBB | BB00 | 63 | 0.32 | BB00 |
| 03 | 3hp6_B_DA23_DT24 | BBB | BB00 | 69 | 0.17 | BB00 |
| 04 | 3hp6_B_DT24_DC25 | B-A | BA05 | 16 | 0.23 | BA05 |
| 05 | 3hp6_B_DC25_DA26 | BBB | BB01 | 60 | 0.28 | BB01 |
| 06 | 3hp6_B_DA26_DC27 | B-A | BA01 | 13 | 0.34 | BA01 |
| 07 | 3hp6_B_DC27_DG28 | AAA | AA00 | 88 | 0.19 | AA00 |
| 08 | 3hp6_C_DA1_DC2 | BBw | BB16 | 24 | 0.68 | BB16 |
| 09 | 3hp6_C_DC2_DG3 | NAN | NANT | 0 | 1.45 | OP31 |
| 10 | 3hp6_C_DG3_DC4 | AAA | AA00 | 54 | 0.26 | AA00 |
| 11 | 3hp6_C_DC4_DC5 | AAA | AA00 | 60 | 0.24 | AA00 |
| 12 | 3hp6_C_DC5_DG6 | AAw | AA01 | 92 | 0.14 | AA01 |
| 13 | 3hp6_C_DG6_DT7 | A-B | AB04 | 87 | 0.16 | AB04 |
| 14 | 3hp6_C_DT7_DG8 | BBB | BB00 | 80 | 0.18 | BB00 |
| 15 | 3hp6_C_DG8_DA9 | BBB | BB00 | 96 | 0.15 | BB00 |
| 16 | 3hp6_C_DA9_DT10 | B-A | BA01 | 78 | 0.30 | BA01 |
| 17 | 3hp6_C_DT10_DC11 | AAA | AA02 | 46 | 0.50 | AA02 |
| 18 | 3hp6_C_DC11_DG12 | A-B | AB01 | 14 | 0.33 | AB01 |
| 19 | 3hp6_E_DC21_DG22 | NAN | NANT | 0 | 0.39 | AB03 |
| 20 | 3hp6_E_DG22_DA23 | BBB | BB00 | 72 | 0.20 | BB00 |
| 21 | 3hp6_E_DA23_DT24 | BBB | BB00 | 85 | 0.18 | BB00 |
| 22 | 3hp6_E_DT24_DC25 | B-A | BA01 | 33 | 0.28 | BA01 |
| 23 | 3hp6_E_DC25_DA26 | AAA | AA00 | 23 | 0.31 | AA00 |
| 24 | 3hp6_E_DA26_DC27 | AAA | AA00 | 38 | 0.23 | AA00 |
| 25 | 3hp6_E_DC27_DG28 | AAA | AA00 | 75 | 0.19 | AA00 |
| 26 | 3hp6_F_DA1_DC2 | BBB | BB00 | 34 | 0.28 | BB00 |
| 27 | 3hp6_F_DC2_DG3 | NAN | NANT | 0 | 1.44 | OP31 |
| 28 | 3hp6_F_DG3_DC4 | AAA | AA00 | 51 | 0.26 | AA00 |
| 29 | 3hp6_F_DC4_DC5 | AAA | AA00 | 67 | 0.25 | AA00 |
| 30 | 3hp6_F_DC5_DG6 | AAw | AA01 | 95 | 0.14 | AA01 |
| 31 | 3hp6_F_DG6_DT7 | A-B | AB04 | 89 | 0.16 | AB04 |
| 32 | 3hp6_F_DT7_DG8 | BBB | BB00 | 50 | 0.27 | BB00 |
| 33 | 3hp6_F_DG8_DA9 | BBB | BB00 | 73 | 0.15 | BB00 |
| 34 | 3hp6_F_DA9_DT10 | B-A | BA05 | 88 | 0.14 | BA05 |
| 35 | 3hp6_F_DT10_DC11 | BBB | BB01 | 34 | 0.28 | BB01 |
| 36 | 3hp6_F_DC11_DG12 | BBB | BB00 | 23 | 0.43 | BB00 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Download
Results as csv or json file.Restraints file for Phenix (steps with RMSD <= 0.5Å)
Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Best NtC fitted to input structure.
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Show
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