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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Architecture and DNA recognition elements of the Fanconi anemia FANCM- FAAP24 complex

Results of the assignment of 20 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
014bxo_H_DG1_DA2NANNANT00.53AB02
024bxo_H_DA2_DT3NANNANT00.56BB13
034bxo_H_DT3_DG4BBBBB00300.80BB00
044bxo_H_DG4_DA5BB2BB07930.20BB07
054bxo_H_DA5_DT6B-ABA01620.21BA01
064bxo_H_DT6_DG7NANNANT00.49BB17
074bxo_H_DG7_DC8BB2BB08500.30BB08
084bxo_H_DC8_DT9NANNANT00.38BB01
094bxo_H_DT9_DG10BBBBB00480.40BB00
104bxo_H_DG10_DA11NANNANT00.47BB04
114bxo_I_DT1_DC2NANNANT00.65AA09
124bxo_I_DC2_DA3NANNANT00.65BB04
134bxo_I_DA3_DG4miBBB15580.28BB15
144bxo_I_DG4_DC5B-ABA05810.23BA05
154bxo_I_DC5_DA6BBBBB01380.32BB01
164bxo_I_DA6_DT7BBBBB00520.22BB00
174bxo_I_DT7_DC8BBBBB00600.34BB00
184bxo_I_DC8_DA9BB2BB07640.34BB07
194bxo_I_DA9_DT10NANNANT00.32AB02
204bxo_I_DT10_DC11NANNANT00.42BA13

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

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Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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