Click the Summary/Torsions/Similar/... tabs for more details.
Center view on step or molecule.
Show reference and contacts model altloc

Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.

©Jiří Černý & Bohdan Schneider

Structure of Thermus thermophilus Argonaute bound to guide DNA 19-mer and target DNA in the presence of MN2+

Results of the assignment of 58 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Your browser does not support the HTML5 canvas tag.
Your browser does not support the HTML5 canvas tag.
Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
014nca_C_DT1_DG2NANNANT00.89OP21
024nca_C_DG2_DA3B-ABA01560.22BA01
034nca_C_DA3_DG4AAAAA00420.27AA00
044nca_C_DG4_DG5A-BAB01770.22AB01
054nca_C_DG5_DT6BBBBB01900.19BB01
064nca_C_DT6_DA7B-ABA10360.36BA10
074nca_C_DA7_DG8AAAAA08860.17AA08
084nca_C_DG8_DT9AAAAA00610.23AA00
094nca_C_DT9_DA10AAwAA01600.40AA01
104nca_C_DA10_DG11AAAAA08780.25AA08
114nca_C_DG11_DG12NANNANT00.36AA04
124nca_C_DG12_DT13NANNANT00.75BB16
134nca_C_DT13_DT14BBBBB00840.15BB00
144nca_C_DT14_DG15BBBBB00820.37BB00
154nca_C_DG15_DT16B12BB04520.32BB04
164nca_D_DT10_DA11NANNANT00.49BB16
174nca_D_DA11_DC12B-ABA0590.39BA05
184nca_D_DC12_DT13A-BAB05240.19AB05
194nca_D_DT13_DA14BBBBB00610.32BB00
204nca_D_DA14_DC15BBBBB01240.19BB01
214nca_D_DC15_DC16A-BAB01110.34AB01
224nca_D_DC16_DT17B-ABA01160.27BA01
234nca_D_DT17_DC18A-BAB03930.18AB03
244nca_D_DC18_DG19NANNANT01.56OP22
254nca_E_DT1_DG2NANNANT00.90OP21
264nca_E_DG2_DA3B-ABA01190.20BA01
274nca_E_DA3_DG4AAAAA00450.28AA00
284nca_E_DG4_DG5A-BAB01730.21AB01
294nca_E_DG5_DT6BBBBB00850.17BB00
304nca_E_DT6_DA7B-ABA10850.37BA10
314nca_E_DA7_DG8AAAAA00760.18AA00
324nca_E_DG8_DT9AAAAA00900.13AA00
334nca_E_DT9_DA10AAAAA00680.21AA00
344nca_E_DA10_DG11AAAAA00390.31AA00
354nca_E_DG11_DG12A-BAB04460.42AB04
364nca_E_DG12_DT13BBBBB00190.33BB00
374nca_E_DT13_DT14BBBBB00880.15BB00
384nca_E_DT14_DG15BBBBB00770.36BB00
394nca_E_DG15_DT16B12BB04520.29BB04
404nca_F_DT10_DA11AAAAA00190.44AA00
414nca_F_DA11_DC12AAAAA00280.41AA00
424nca_F_DC12_DT13NANNANT00.47AB04
434nca_F_DT13_DA14BBBBB00330.42BB00
444nca_F_DA14_DC15BBBBB01850.20BB01
454nca_F_DC15_DC16BBBBB00480.32BB00
464nca_F_DC16_DT17B-ABA01170.21BA01
474nca_F_DT17_DC18A-BAB01430.36AB01
484nca_F_DC18_DG19NANNANT01.57OP22
494nca_G_DA1_DC2BBBBB00860.17BB00
504nca_G_DC2_DA3BBBBB00340.32BB00
514nca_G_DA3_DA4BBBBB00250.40BB00
524nca_G_DA4_DC5B-ABA13380.35BA13
534nca_G_DC5_DC6AAAAA00860.21AA00
544nca_H_DA4_DC5BBBBB00500.31BB00
554nca_H_DC5_DA6NANNANT00.28BB04
564nca_H_DA6_DA7BBBBB00620.33BB00
574nca_H_DA7_DC8B-ABA10470.34BA10
584nca_H_DC8_DC9AAAAA00830.22AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of