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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Crystal structure of human dna polymerase eta in ternary complex with native dna and incoming nucleotide (dcp)

Results of the assignment of 18 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
014o3n_T_DA2_DT3NANNANT02.24OP19
024o3n_T_DT3_DG4NANNANT00.50BB00
034o3n_T_DG4_DA5BBBBB00840.14BB00
044o3n_T_DA5_DT6B-ABA09760.31BA09
054o3n_T_DT6_DG7NANNANT00.50AB04
064o3n_T_DG7_DA8BBBBB00110.37BB00
074o3n_T_DA8_DC9BBBBB00920.24BB00
084o3n_T_DC9_DG10B12BB04800.25BB04
094o3n_T_DG10_DC11BBBBB00810.12BB00
104o3n_T_DC11_DT12B-ABA05890.24BA05
114o3n_P_DA1_DG2BB1BB16420.35BB16
124o3n_P_DG2_DC3BBBBB00610.24BB00
134o3n_P_DC3_DG4BBBBB01830.13BB01
144o3n_P_DG4_DT5BBBBB00760.20BB00
154o3n_P_DT5_DC6B-ABA05890.22BA05
164o3n_P_DC6_DA7B-ABA05170.28BA05
174o3n_P_DA7_DT.A8A-BAB01290.28AB01
184o3n_P_DA7_DT.B8A-BAB02200.53AB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Drag the plot for panning, scroll to zoom, click a point to show superposition in JSmol.

Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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