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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Human DNA polymerase lambda- MgdATP binary complex and complex with 6 paired DNA

Results of the assignment of 10 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
014xq8_P_DC1_DA2BB1BB16260.41BB16
024xq8_P_DA2_DG3B-ABA05810.14BA05
034xq8_P_DG3_DT4B-ABA05640.23BA05
044xq8_P_DT4_DA5AAAAA00520.36AA00
054xq8_P_DA5_DC6AAAAA08670.33AA08
064xq8_T_DG6_DT7B-ABA05700.27BA05
074xq8_T_DT7_DA8BBBBB01710.20BB01
084xq8_T_DA8_DC9B-ABA08840.32BA08
094xq8_T_DC9_DT10A-BAB05570.22AB05
104xq8_T_DT10_DG11BBBBB00520.26BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

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Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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