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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Structure of the complex of a human telomeric DNA with Au(caffein-2-ylidene)2

Results of the assignment of 17 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
015ccw_A_DA2_DG3NANNANT00.58OP14
025ccw_A_DG3_DG4A-BAB02740.23AB02
035ccw_A_DG4_DG5BBBBB00420.23BB00
045ccw_A_DG5_DT6OPNOP21460.55OP21
055ccw_A_DT6_DT7NANNANT00.65OP10
065ccw_A_DT7_DA8OPNOP21780.17OP21
075ccw_A_DA8_DG9NANNANT00.98IC05
085ccw_A_DG9_DG10BBBBB00680.21BB00
095ccw_A_DG10_DG11BBBBB00860.13BB00
105ccw_A_DG15_DG16BBBBB00460.26BB00
115ccw_A_DG16_DG17BBBBB00560.28BB00
125ccw_A_DG17_DT18NANNANT00.67OP21
135ccw_A_DT18_DT19NANNANT01.68OP1S
145ccw_A_DT19_DA20NANNANT00.54OP21
155ccw_A_DA20_DG21NANNANT00.56OP10
165ccw_A_DG21_DG22BBBBB00590.29BB00
175ccw_A_DG22_DG23BBBBB01640.28BB01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Drag the plot for panning, scroll to zoom, click a point to show superposition in JSmol.

Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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