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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Enterovirus 71 Polymerase Elongation Complex (C1S2/3 Form)

Results of the assignment of 20 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
015f8i_B_G599_G600NANNANT00.56OP06
025f8i_B_G600_U601AAAAA00860.18AA00
035f8i_B_U601_C602AA1AA01380.35AA01
045f8i_B_C602_U603AAAAA00880.17AA00
055f8i_B_U603_C604AAAAA00910.14AA00
065f8i_B_C604_U605AAAAA00860.14AA00
075f8i_B_U605_C606AAAAA00640.22AA00
085f8i_B_C606_U607AAAAA00830.13AA00
095f8i_B_U607_C608AAAAA08740.22AA08
105f8i_B_C608_G609AA1AA06840.15AA06
115f8i_B_G609_U610AAAAA08340.29AA08
125f8i_C_A692_C693AAAAA00860.15AA00
135f8i_C_C693_G694AA1AA06280.26AA06
145f8i_C_G694_A695AAAAA08510.34AA08
155f8i_C_A695_G696AAAAA08760.26AA08
165f8i_C_G696_A697AAAAA00680.20AA00
175f8i_C_A697_G698AAAAA00820.20AA00
185f8i_C_G698_A699AAAAA08720.21AA08
195f8i_C_A699_G700AAAAA00920.15AA00
205f8i_C_G700_A701AAAAA00640.26AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Drag the plot for panning, scroll to zoom, click a point to show superposition in JSmol.

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Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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