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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Bat influenza A/H17N10 polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTD

Results of the assignment of 26 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
015m3h_R_U1_A2AAAAA00940.12AA00
025m3h_R_A2_U3AAAAA00560.08AA00
035m3h_R_U3_A4NANNANT00.33AA01
045m3h_R_A4_C5NANNANT00.53AA11
055m3h_R_C5_C6AAAAA08820.26AA08
065m3h_R_C6_U7AAAAA00840.16AA00
075m3h_R_U7_C8AAAAA00910.17AA00
085m3h_R_C8_U9AAAAA00910.11AA00
095m3h_R_U9_G10NANNANT00.43AB2S
105m3h_R_G10_C11NANNANT00.57OP21
115m3h_R_C11_U12A-BAB04850.25AB04
125m3h_V_A1_G2AAAAA08720.35AA08
135m3h_V_G2_U3AAAAA00470.25AA00
145m3h_V_U3_A4AAAAA08120.81AA08
155m3h_V_A4_G5SYNAB2S960.10AB2S
165m3h_V_G5_U6NANNANT01.39OPS1
175m3h_V_U6_A7NANNANT01.84IC05
185m3h_V_A7_A8B-ABA10510.40BA10
195m3h_V_A8_C9AAAAA00730.16AA00
205m3h_V_C9_A10AAAAA08560.36AA08
215m3h_V_A10_A11NANNANT01.57OP01
225m3h_V_A11_G12AAAAA00900.24AA00
235m3h_V_G12_A13AAAAA00910.12AA00
245m3h_V_A13_G14AAAAA00790.12AA00
255m3h_V_G14_G15AAAAA00840.16AA00
265m3h_V_G15_G16NANNANT01.47OP19

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

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Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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