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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
B. subtilis SsbA with DNA

Results of the assignment of 9 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
16bhx_E_DT1_DT2NANNANT01.09BA13
26bhx_E_DT2_DT3NANNANT00.92OPS1
36bhx_E_DT3_DT4A-BAB05630.33AB05
46bhx_E_DT7_DT8NANNANT00.85AB1S
56bhx_E_DT8_DT9NANNANT00.56OPS1
66bhx_E_DT9_DT10NANNANT00.58IC01
76bhx_E_DT10_DT11OPNOP12200.55OP12
86bhx_E_DT11_DT12NANNANT01.98BB03
96bhx_E_DT12_DT13NANNANT00.87OP21

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Drag the plot for panning, scroll to zoom, click a point to show superposition in JSmol.

Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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