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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 120 s at 21 C (dataset 2)

Results of the assignment of 13 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
016doq_B_A1_C2AAAAA00460.26AA00
026doq_B_C2_A3AAAAA00860.17AA00
036doq_B_A3_U.A4AA1AA01840.14AA01
046doq_B_A3_U.B4NANNANT00.59AA10
056doq_B_A3_U.C4AA1AA01880.16AA01
066doq_b_C.A5_G6NANNANT00.65AA10
076doq_b_C.B5_G6NANNANT00.65AA10
086doq_b_C.C5_G6NANNANT00.65AA10
096doq_C_DC1_DG2AAAAA00800.15AA00
106doq_C_DG2_DA3NANNANT00.24AA04
116doq_C_DA3_DT4BB1BB16200.73BB16
126doq_C_DT4_DG5B-ABA10480.51BA10
136doq_C_DG5_DT6A-BAB05580.28AB05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

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Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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