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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
The animal-like Cryptochrome from Chlamydomonas reinhardtii in complex with 6-4 DNA

Results of the assignment of 24 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
016fn0_C_DC1_DA2NANNANT01.02AB02
026fn0_C_DA2_DG3BB1BB11120.37BB11
036fn0_C_DG3_DC4NANNANT00.44BB10
046fn0_C_DC4_DG5miBBB14450.53BB14
056fn0_C_DG5_DG6NANNANT00.62BB17
066fn0_C_5PY8_DG9NANNANT01.32OP20
076fn0_C_DG9_DC10B-ABA05810.18BA05
086fn0_C_DC10_DC11A-BAB03710.34AB03
096fn0_C_DC11_DG12BBBBB00860.17BB00
106fn0_C_DG12_DT13BBBBB01610.23BB01
116fn0_C_DT13_DG14miBBB10440.21BB10
126fn0_D_DC1_DA2BBBBB00320.29BB00
136fn0_D_DA2_DC3B-ABA08770.27BA08
146fn0_D_DC3_DG4A-BAB02560.40AB02
156fn0_D_DG4_DG5B-ABA05130.45BA05
166fn0_D_DG5_DC6NANNANT00.40AB02
176fn0_D_DC6_DA7NANNANT00.55IC06
186fn0_D_DA7_DA8miBBB12750.27BB12
196fn0_D_DA8_DC9NANNANT00.96IC03
206fn0_D_DC9_DC10BBBBB00420.35BB00
216fn0_D_DC10_DG11BB2BB07760.16BB07
226fn0_D_DG11_DC12BBBBB00840.25BB00
236fn0_D_DC12_DT13B-ABA08810.36BA08
246fn0_D_DT13_DG14NANNANT00.76IC01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

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Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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