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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Bst DNA polymerase I TNA/DNA binary complex

Results of the assignment of 9 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
16mu5_P_DG1_DC2NANNANT00.46BA10
26mu5_P_DC2_DG3A-BAB02500.42AB02
36mu5_P_DG3_DA4BBBBB00430.16BB00
46mu5_P_DA4_DT5BBBBB01750.17BB01
56mu5_P_DT5_DC6BBBBB01860.20BB01
66mu5_P_DC6_DA7BBBBB00530.26BB00
76mu5_P_DA7_DC8B-ABA08860.24BA08
86mu5_P_DC8_DG9A-BAB01560.20AB01
96mu5_P_DG9_DT10BBBBB01900.23BB01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

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Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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