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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Human TCF4 C-terminal bHLH domain in Complex with 12-bp Oligonucleotide Containing E-box Sequence with 5-carboxylcytosines

Results of the assignment of 27 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
016od5_X_DG3_DC4B-ABA05610.24BA05
026od5_X_DC4_DA5A-BAB01690.18AB01
036od5_X_DA5_DC6BBBBB00880.14BB00
046od5_X_DC6_DG7BBBBB00370.41BB00
056od5_X_DG7_DT8B-ABA05660.21BA05
066od5_X_DT8_DG9A-BAB01660.25AB01
076od5_X_DG11_DT12B-ABA09620.33BA09
086od5_Y_DG3_DC4BBBBB00900.20BB00
096od5_Y_DC4_DA5B12BB04570.32BB04
106od5_Y_DA5_DC6BBBBB00810.18BB00
116od5_Y_DC6_DG7BBBBB00740.33BB00
126od5_Y_DG7_DT8B-ABA01300.26BA01
136od5_Y_DT8_DG9A-BAB01830.18AB01
146od5_Y_DG11_DT12B-ABA01480.19BA01
156od5_E_DG3_DC4BBBBB00940.18BB00
166od5_E_DC4_DA5BB2BB07640.17BB07
176od5_E_DA5_DC6BBBBB00830.17BB00
186od5_E_DC6_DG7BBBBB00640.36BB00
196od5_E_DG7_DT8B-ABA01420.23BA01
206od5_E_DT8_DG9A-BAB01820.20AB01
216od5_E_DG11_DT12B-ABA01560.18BA01
226od5_F_DG3_DC4B-ABA05640.24BA05
236od5_F_DC4_DA5A-BAB01730.20AB01
246od5_F_DA5_DC6BBBBB00790.17BB00
256od5_F_DC6_DG7BBBBB00420.43BB00
266od5_F_DG7_DT8B-ABA01260.28BA01
276od5_F_DT8_DG9A-BAB01640.26AB01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

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Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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