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Conformers: ABBIImiBZICOPNSYNN See the J(S)mol wiki for description of applet controls.
Lysine acetylated and tyrosine phosphorylated STAT3 in a complex with DNA

Results of the assignment of 34 detected steps in 1 model(s), can be also downloaded as csv file. Average confal 0, percentile 0.

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Click a row in table or a step in JSmol for analysis of results. Click column headers to sort data.
step numberStep nameCANANtCconfalrmsd
016qhd_C_DA1001_DA1002A-BAB03810.25AB03
026qhd_C_DA1002_DG1003BBBBB00730.21BB00
036qhd_C_DG1003_DA1004BBBBB01500.25BB01
046qhd_C_DA1004_DT1005B-ABA05540.17BA05
056qhd_C_DT1005_DT1006B-ABA05510.30BA05
066qhd_C_DT1006_DT1007NANNANT00.31AB03
076qhd_C_DT1007_DA1008BBBBB01610.23BB01
086qhd_C_DA1008_DC1009BBBBB00260.39BB00
096qhd_C_DC1009_DG1010B12BB04640.36BB04
106qhd_C_DG1010_DG1011BBBBB00620.43BB00
116qhd_C_DG1011_DG1012B-ABA0580.50BA05
126qhd_C_DG1012_DA1013BBBBB01620.17BB01
136qhd_C_DA1013_DA1014BBBBB01690.22BB01
146qhd_C_DA1014_DA1015NANNANT00.51BB17
156qhd_C_DA1015_DT1016B-ABA05350.20BA05
166qhd_C_DT1016_DG1017BBBBB01410.27BB01
176qhd_C_DG1017_DC1018NANNANT00.34BB15
186qhd_D_DT1001_DG1002A-BAB03280.29AB03
196qhd_D_DG1002_DC1003BBBBB01830.22BB01
206qhd_D_DC1003_DA1004BBBBB01510.24BB01
216qhd_D_DA1004_DT1005B-ABA05530.17BA05
226qhd_D_DT1005_DT1006BBBBB01330.31BB01
236qhd_D_DT1006_DT1007NANNANT00.31AB03
246qhd_D_DT1007_DC1008BBBBB01560.23BB01
256qhd_D_DC1008_DC1009BBBBB01390.36BB01
266qhd_D_DC1009_DC1010B12BB04550.36BB04
276qhd_D_DC1010_DG1011BBBBB00530.46BB00
286qhd_D_DG1011_DT1012B-ABA0580.41BA05
296qhd_D_DT1012_DA1013BBBBB01320.24BB01
306qhd_D_DA1013_DA1014BBBBB01690.22BB01
316qhd_D_DA1014_DA1015NANNANT00.30BB01
326qhd_D_DA1015_DT1016B-ABA05410.19BA05
336qhd_D_DT1016_DC1017BBBBB01480.27BB01
346qhd_D_DC1017_DT1018miBBB10110.40BB10

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

© Jiří Černý & Bohdan Schneider

Definition of torsion angles
step:
Table of conformers

δεζα1β1γ1δ1χχ1NCCNNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA

Similarity of step to class averages

Drag the plot for panning, scroll to zoom, click a point to show superposition in JSmol.

Download

Results (as csv)
Restraints (default edits file)
Best NtC fitted to input structure.

Definition of the conformers as torsion averages (csv) and their esd values (csv) or as their Cartesian coordinates of the conformers

Download the papers:

description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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